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346 lines
13 KiB
346 lines
13 KiB
<?php |
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/* @file |
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*/ |
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/** |
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* @file |
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* Darwin Core class |
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*/ |
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/** |
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* Darwin Core ??? |
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*/ |
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class DarwinCore { |
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/** |
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* Constructor |
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* @param type $item |
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*/ |
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function __construct($item = NULL) { |
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module_load_include('inc', 'fedora_repository', 'api/fedora_item'); |
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if (!empty($item)) { |
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$this->owner = $item; |
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if (array_key_exists('DARWIN_CORE', $item->get_datastreams_list_as_array())) { |
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$dwc = $item->get_datastream_dissemination('DARWIN_CORE'); |
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if (!empty($dwc)) { |
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$this->darwinCoreXML = $dwc; |
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} |
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} |
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} |
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} |
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/** |
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* Build Drupal Form |
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* @param type $form |
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* @return int |
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*/ |
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public function buildDrupalForm($form = array()) { |
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$dwc_xml = $this->darwinCoreXML; |
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$dwc = DOMDocument::loadXML($dwc_xml); |
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$form['dc:type'] = array( |
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'#title' => 'dc:type', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://purl.org/dc/terms/', 'type')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dc:language'] = array( |
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'#title' => 'dc:language', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://purl.org/dc/terms/', 'language')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:basisOfRecord'] = array( |
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'#title' => 'Basis of Record', |
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'#type' => 'select', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'basisOfRecord')->item(0)->nodeValue, |
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'#options' => $this->vocabulary['basisOfRecord'], |
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'#description' => '', |
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); |
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$form['dwc:scientificName'] = array( |
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'#title' => 'dwc:scientificName', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'scientificName')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:specificEpithet'] = array( |
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'#title' => 'dwc:specificEpithet', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'specificEpithet')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:family'] = array( |
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'#title' => 'dwc:family', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'family')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:genus'] = array( |
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'#title' => 'dwc:genus', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'genus')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:vernacularName'] = array( |
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'#title' => 'dwc:vernacularName', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'vernacularName')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:continent'] = array( |
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'#title' => 'dwc:continent', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'continent')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:country'] = array( |
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'#title' => 'dwc:country', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'country')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:stateProvince'] = array( |
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'#title' => 'dwc:stateProvince', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'stateProvince')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:county'] = array( |
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'#title' => 'dwc:county', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'county')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:locality'] = array( |
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'#title' => 'dwc:locality', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'locality')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:habitat'] = array( |
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'#title' => 'dwc:habitat', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'habitat')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:occurrenceRemarks'] = array( |
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'#title' => 'dwc:occurrenceRemarks', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'occurrenceRemarks')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:occurrenceID'] = array( |
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'#title' => 'dwc:occurrenceID', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'occurrenceID')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:institutionCode'] = array( |
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'#title' => 'dwc:institutionCode', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'institutionCode')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:collectionCode'] = array( |
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'#title' => 'dwc:collectionCode', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'collectionCode')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:collectionCode'] = array( |
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'#title' => 'dwc:collectionCode', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'collectionCode')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:catalogNumber'] = array( |
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'#title' => 'dwc:catalogNumber', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'catalogNumber')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:catalogNumber'] = array( |
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'#title' => 'dwc:catalogNumber', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'catalogNumber')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$form['dwc:recordedBy'] = array( |
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'#title' => 'dwc:recordedBy', |
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'#type' => 'textfield', |
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'#default_value' => $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'recordedBy')->item(0)->nodeValue, |
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'#description' => '', |
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); |
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$date = $dwc->getElementsByTagNameNS('http://rs.tdwg.org/dwc/terms/', 'eventDate')->item(0)->nodeValue; |
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$format = 'Y-m-d H:i:s'; |
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$form['dwceventDate'] = array( |
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'#type' => 'date_popup', // types 'date_text' and 'date_timezone' are also supported. See .inc file. |
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'#title' => 'select a date', |
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'#default_value' => $date, |
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'#date_format' => $format, |
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'#date_label_position' => 'within', // See other available attributes and what they do in date_api_elements.inc |
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'#date_increment' => 15, // Optional, used by the date_select and date_popup elements to increment minutes and seconds. |
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'#description' => '', |
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); |
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return $form; |
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} |
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/** |
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* Handle Form ?? |
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* @global type $user |
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* @param type $form_values |
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*/ |
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public function handleForm($form_values) { |
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module_load_include('inc', 'fedora_repository', 'api/fedora_item'); |
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global $user; |
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//$new_item = Fedora_Item::ingest_new_item($form_values['pid'], 'A', $form_values['dwc:institutionCode'].':'.$form_values['dwc:collectionCode'].':'.$form_values['dwc:catalogNumber'], $user->name); |
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//$new_item->add_datastream_from_string($this->darwinCoreXML, 'DARWIN_CORE', 'Darwin Core Metadata', 'text/xml', 'X'); |
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// For each form element, find and replace that element's value in the XML stream. |
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$dwc = new SimpleXMLElement($this->darwinCoreXML); |
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$dc_elements = $dwc->SimpleDarwinRecord->children('http://purl.org/dc/terms/'); |
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$dc_elements->type = $form_values['dc:type']; |
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$dc_elements->language = $form_values['dc:language']; |
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$dwc_elements = $dwc->SimpleDarwinRecord->children('http://rs.tdwg.org/dwc/terms/'); |
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$dwc_elements->basisOfRecord = $form_values['dwc:basisOfRecord']; |
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$dwc_elements->scientificName = $form_values['dwc:scientificName']; |
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$dwc_elements->specificName = $form_values['dwc:specificName']; |
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$dwc_elements->specificName = $form_values['dwc:family']; |
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$dwc_elements->genus = $form_values['dwc:genus']; |
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$dwc_elements->vernacularName = $form_values['dwc:vernacularName']; |
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$dwc_elements->continent = $form_values['dwc:continent']; |
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$dwc_elements->country = $form_values['dwc:country']; |
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$dwc_elements->countryCode = $form_values['dwc:countryCode']; |
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$dwc_elements->stateProvince = $form_values['dwc:stateProvince']; |
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$dwc_elements->locality = $form_values['dwc:locality']; |
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$dwc_elements->habitat = $form_values['dwc:habitat']; |
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$dwc_elements->occurrenceRemarks = $form_values['dwc:occurrenceRemarks']; |
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$dwc_elements->occurrenceID = $form_values['dwc:occurrenceID']; |
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$dwc_elements->institutionCode = $form_values['dwc:institutionCode']; |
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$dwc_elements->collectionCode = $form_values['dwc:collectionCode']; |
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$dwc_elements->catalogNumber = $form_values['dwc:catalogNumber']; |
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$dwc_elements->recordedBy = $form_values['dwc:recordedBy']; |
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$dwc_elements->eventDate = $form_values['dwceventDate']; |
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$this->darwinCoreXML = $dwc->saveXML(); |
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} |
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/** |
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* asXML ?? |
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* @return type |
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*/ |
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public function asXML() { |
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return $this->darwinCoreXML; |
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} |
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/** |
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* asHTML ?? |
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* @return type |
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*/ |
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public function asHTML() { |
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$path = drupal_get_path('module', 'fedora_repository'); |
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module_load_include('inc', 'fedora_repository', 'ObjectHelper'); |
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module_load_include('inc', 'fedora_repository', 'CollectionClass'); |
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$xmlstr = $this->darwinCoreXML; |
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html_entity_decode($xmlstr); |
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if ($xmlstr == NULL || strlen($xmlstr) < 5) { |
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return " "; |
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} |
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try { |
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$proc = new XsltProcessor(); |
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} catch (Exception $e) { |
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drupal_set_message(t('@e', array('@e' => check_plain($e->getMessage()))), 'error'); |
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return " "; |
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} |
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$xsl = new DomDocument(); |
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$xsl->load($path . '/xsl/specdwc.xsl'); |
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$input = new DomDocument(); |
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$input->loadXML(trim($xmlstr)); |
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$xsl = $proc->importStylesheet($xsl); |
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$newdom = $proc->transformToDoc($input); |
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$content = $newdom->saveXML(); |
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return $content; |
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} |
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public $vocabulary = array( |
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'basisOfRecord' => array( |
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'Occurrence' => 'Occurrence', |
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'Event' => 'Event', |
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'Location' => 'Location', |
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'Taxon' => 'Taxon', |
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'PreservedSpecimen' => 'PreservedSpecimen', |
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'FossilSpecimen' => 'FossilSpecimen', |
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'LivingSpecimen' => 'LivingSpecimen', |
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'HumanObservation' => 'HumanObservation', |
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'MachineObservation' => 'MachineObservation', |
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'NomenclaturalChecklist' => 'NomenclaturalChecklist', |
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), |
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); |
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public $dwcFields = array( |
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'dc:type', |
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'dc:language', |
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'dwc:basisofrecord', |
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'dwc:scientificName', |
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'dwc:specificName', |
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'dwc:family', |
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'dwc:genus', |
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'dwc:vernacularName', |
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'dwc:continent', |
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'dwc:country', |
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'dwc:countryCode', |
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'dwc:stateProvince', |
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'dwc:locality', |
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'dwc:habitat', |
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'dwc:occurrenceRemarks', |
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'dwc:occurrenceID', |
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'dwc:institutionCode', |
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'dwc:collectionCode', |
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'dwc:catalogNumber', |
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'dwc:recordedBy', |
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'dwc:eventDate', |
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'dwc:eventTime', |
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); |
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public $darwinCoreXML = ' |
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<SimpleDarwinRecordSet xmlns="http://rs.tdwg.org/dwc/xsd/simpledarwincore/" xmlns:dc="http://purl.org/dc/terms/" xmlns:dwc="http://rs.tdwg.org/dwc/terms/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://rs.tdwg.org/dwc/xsd/simpledarwincore/ http://rs.tdwg.org/dwc/xsd/tdwg_dwc_simple.xsd"> |
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<SimpleDarwinRecord> |
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<dc:type></dc:type> |
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<dc:language>en</dc:language> |
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<dwc:basisOfRecord></dwc:basisOfRecord> |
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<dwc:scientificName></dwc:scientificName> |
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<dwc:specificEpithet></dwc:specificEpithet> |
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<dwc:family></dwc:family> |
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<dwc:genus></dwc:genus> |
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<dwc:vernacularName></dwc:vernacularName> |
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<dwc:continent></dwc:continent> |
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<dwc:country></dwc:country> |
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<dwc:countryCode></dwc:countryCode> |
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<dwc:stateProvince></dwc:stateProvince> |
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<dwc:county></dwc:county> |
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<dwc:locality></dwc:locality> |
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<dwc:habitat></dwc:habitat> |
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<dwc:occurrenceRemarks></dwc:occurrenceRemarks> |
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<dwc:occurrenceID></dwc:occurrenceID> |
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<dwc:institutionCode></dwc:institutionCode> |
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<dwc:collectionCode></dwc:collectionCode> |
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<dwc:catalogNumber></dwc:catalogNumber> |
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<dwc:recordedBy></dwc:recordedBy> |
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<dwc:eventDate></dwc:eventDate> |
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<dwc:eventTime></dwc:eventTime> |
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</SimpleDarwinRecord> |
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</SimpleDarwinRecordSet>'; |
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}
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